Motif View

Internal ID 17655752
Source Database TransTermHP TERM 237
Feature Type terminator
Name
Rho-independent transcription terminator TERM 237
Sequence GACCCCGCGCGGTGCGAGCCGCGCGGGGTC
Look for more occurrences
Start 971645
End 971674
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCTGATCCGAAAC(5' tail) GACCCCGCGCGGT(5' stem) GCGA(loop) GCCGCGCGGGGTC(3' stem) TTTCATTTGGCGCGG(3' tail). Confidence: 100. opp_overlap 971645 971644 971647

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685