Motif View

Internal ID 17655766
Source Database TransTermHP TERM 256
Feature Type terminator
Name
Rho-independent transcription terminator TERM 256
Sequence GGCCACGGGCGCTCGCAGGCTGCCCGTGGCC
Look for more occurrences
Start 1025312
End 1025342
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGAGGCGGAAACA(5' tail) GGCCACGGGC-GCT(5' stem) CGCA(loop) GGCTGCCCGTGGCC(3' stem) TTTTCGTTTCCGGAA(3' tail). Confidence: 100. gap 1, opp_overlap 1025310 1025312

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685