Motif View

Internal ID 17655768
Source Database TransTermHP TERM 258
Feature Type terminator
Name
Rho-independent transcription terminator TERM 258
Sequence CCGTGGCAGCCCGGCTGCCACGG
Look for more occurrences
Start 1026243
End 1026265
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTAATGGGAAAATTA(5' tail) CCGTGGCAGC(5' stem) CGG(loop) GCTGCCACGG(3' stem) CATCTGAATCAGCCG(3' tail). Confidence: 93. overlap 1026240

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685