Motif View

Internal ID 17655785
Source Database TransTermHP TERM 288
Feature Type terminator
Name
Rho-independent transcription terminator TERM 288
Sequence TCAAGGGTTGAGAGCGTTAGGCTCTAAACGCTTGA
Look for more occurrences
Start 1117574
End 1117608
Strand +
Genomic Context Located within gene P8
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGGAAAGCAGCTTG(5' tail) TCAAGGGTTGAGAGC(5' stem) GTTAG(loop) GCTCTAAACGCTTGA(3' stem) TTTTTCATGTTTGAA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685