Motif View

Internal ID 17655787
Source Database TransTermHP TERM 292
Feature Type terminator
Name
Rho-independent transcription terminator TERM 292
Sequence GGCCCGCTGAGCAGCGGGCC
Look for more occurrences
Start 1123103
End 1123122
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCGCCAACGAAAA(5' tail) GGCCCGCT(5' stem) GCTC(loop) AGCGGGCC(3' stem) TTCGGATGCCGGCGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685