Motif View

Internal ID 17655821
Source Database TransTermHP TERM 351
Feature Type terminator
Name
Rho-independent transcription terminator TERM 351
Sequence GCCCCTGCCATCGCGGCAGGGGC
Look for more occurrences
Start 1436427
End 1436449
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGCCAAAACGGCAA(5' tail) GCCCCTGCC(5' stem) ATCGC(loop) GGCAGGGGC(3' stem) TTTTTCCTGCCGGCG(3' tail). Confidence: 100. opp_overlap 1436422 1436421

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685