Motif View

Internal ID 17656118
Source Database TransTermHP TERM 803
Feature Type terminator
Name
Rho-independent transcription terminator TERM 803
Sequence GGGCGGCCTAGGCCGCCC
Look for more occurrences
Start 3548070
End 3548087
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGGAAAACGAAAAA(5' tail) GGGCGGC(5' stem) CTAG(loop) GCCGCCC(3' stem) TTTTTCATGATGGAT(3' tail). Confidence: 100. opp_overlap 3548070, overlap 3548064 3548063

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685