Motif View

Internal ID 17656566
Source Database TransTermHP TERM 1502
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1502
Sequence CGACGCGGCCCACGGGCCGCGTCG
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Start 6103099
End 6103122
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCTCCGGCAACAAC(5' tail) CGACGCGGCC(5' stem) CACG(loop) GGCCGCGTCG(3' stem) TCGTTGGCGCTATCC(3' tail). Confidence: 90. opp_overlap 6103098 6103099

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685