Motif View

Internal ID 17656567
Source Database TransTermHP TERM 1503
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1503
Sequence GGCCGGCCCCCGCGGGGGCCGGCG
Look for more occurrences
Start 6104768
End 6104791
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGAAGTGAGGAAA(5' tail) CGCCGGCCCC(5' stem) CGCG(loop) GGGGCCGGCC(3' stem) AGAGCCATCAATTCT(3' tail). Confidence: 90. overlap 6104751 6104769

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685