Motif View

Internal ID 17656568
Source Database TransTermHP TERM 1504
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1504
Sequence GCCGGCCCCCGCGGGGGCCGGC
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Start 6104769
End 6104790
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGAAGTGAGGAAAC(5' tail) GCCGGCCCC(5' stem) CGCG(loop) GGGGCCGGC(3' stem) CAGAGCCATCAATTC(3' tail). Confidence: 91. overlap 6104751 6104768

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685