Motif View

Internal ID 17656597
Source Database TransTermHP TERM 16
Feature Type terminator
Name
Rho-independent transcription terminator TERM 16
Sequence GGGCCGGCTTTCCCATGGGAGCCGGCCC
Look for more occurrences
Start 40865
End 40892
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACGAGCAGTATCCG(5' tail) GGGCCGGCTTTC(5' stem) CCAT(loop) GGGAGCCGGCCC(3' stem) TTTCTTTTTGCCGCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685