Motif View

Internal ID 17656648
Source Database TransTermHP TERM 102
Feature Type terminator
Name
Rho-independent transcription terminator TERM 102
Sequence CCCGGTTCGCAGCGCAATCCAGGG
Look for more occurrences
Start 484692
End 484715
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGCGCCTTGCGCTT(5' tail) CCC-GGTTCGC(5' stem) AGC(loop) GCAATCCAGGG(3' stem) TTTTTTCTTAGCCTG(3' tail). Confidence: 91. gap 1, overlap 484692

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685