Motif View

Internal ID 17656661
Source Database TransTermHP TERM 123
Feature Type terminator
Name
Rho-independent transcription terminator TERM 123
Sequence GCCCGCCCTTCGGCGGGC
Look for more occurrences
Start 576735
End 576752
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCAGGTGAGAAAGA(5' tail) GCCCGCC(5' stem) CTTC(loop) GGCGGGC(3' stem) TTTTTCATGCCTGCG(3' tail). Confidence: 100. opp_overlap 576733 576735

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685