Motif View

Internal ID 17656662
Source Database TransTermHP TERM 124
Feature Type terminator
Name
Rho-independent transcription terminator TERM 124
Sequence GCCCGCGAAAAGCGGGC
Look for more occurrences
Start 578791
End 578807
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGAACTCGCTCGA(5' tail) GCCCGC(5' stem) GAAAA(loop) GCGGGC(3' stem) TTTTTCATGCCTGTC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685