Motif View

Internal ID 17656682
Source Database TransTermHP TERM 151
Feature Type terminator
Name
Rho-independent transcription terminator TERM 151
Sequence CACCCCGCTGCGGCGGGGTC
Look for more occurrences
Start 703370
End 703389
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGGGCATGACAGGC(5' tail) CACCCCGC(5' stem) TGCG(loop) GCGGGGTC(3' stem) TTTTTCTGGAAGACA(3' tail). Confidence: 100. opp_overlap 703367, overlap 703372

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685