Motif View

Internal ID 17656693
Source Database TransTermHP TERM 164
Feature Type terminator
Name
Rho-independent transcription terminator TERM 164
Sequence CGCCGCGCATATAAGCGCGGCG
Look for more occurrences
Start 728595
End 728616
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGCCGCTACGAAAA(5' tail) CGCCGCGC(5' stem) TTATAT(loop) GCGCGGCG(3' stem) TTTTCGTTTCAGGCG(3' tail). Confidence: 100. opp_overlap 728584 728595 728589

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685