| Internal ID | 17657238 | Source Database | TransTermHP TERM 1054 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1054
|
| Sequence |
CGCTGCAACAAAGCGCGCCCGATTGGGCGCGTTTTTTTGCGCG Look for more occurrences |
| Start | 4649588 |
| End | 4649630 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AACGGCGCTGAGAAA(5' tail) CGC-GCAAAAAAACGCGCCC(5' stem) AATC(loop) GGGCGCGCTTTGTTGCAGCG(3' stem) GAGCGGATCAGATCT(3' tail). Confidence: 100. gap 1, opp_overlap 4649599 4649600, overlap 4649600 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|