Motif View

Internal ID 17657239
Source Database TransTermHP TERM 1056
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1056
Sequence CGCGCCCGATTGGGCGCG
Look for more occurrences
Start 4649600
End 4649617
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAACGCGCAAAAAAA(5' tail) CGCGCCC(5' stem) AATC(loop) GGGCGCG(3' stem) CTTTGTTGCAGCGGA(3' tail). Confidence: 100. opp_overlap 4649600 4649599, overlap 4649588

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685