Motif View

Internal ID 17659998
Source Database TransTermHP TERM 975
Feature Type terminator
Name
Rho-independent transcription terminator TERM 975
Sequence GCCCGCAACCATTACGGGTTGCGGGC
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Start 4356802
End 4356827
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCAGGCTGAAAAAAA(5' tail) GCCCGCAACC(5' stem) CGTAAT(loop) GGTTGCGGGC(3' stem) TTTTTATTGCGCGCC(3' tail). Confidence: 100. opp_overlap 4356802

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685