Motif View

Internal ID 17679677
Source Database TransTermHP TERM 269
Feature Type terminator
Name
Rho-independent transcription terminator TERM 269
Sequence GCCCCGGTAGAACCGGGGC
Look for more occurrences
Start 1345532
End 1345550
Strand +
Genomic Context
Replicon Pseudomonas stutzeri DSM 10701 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCAGTGAAATGAAAA(5' tail) GCCCCGGT(5' stem) AGA(loop) ACCGGGGC(3' stem) TTTCTTGCATCAGAA(3' tail). Confidence: 100. opp_overlap 1345532

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685