Strain Overview | |
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Organism Name | Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 |
Species | Pseudomonas stutzeri |
Strain | ATCC 17588 = LMG 11199 |
Description/Title | Sample from Pseudomonas stutzeri ATCC 17588 = LMG 11199 |
Annotated Genes | 4314 |
Partial Genes |
Host Information |
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Geographic Location |
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Database | Scheme | Sequence Type | Alleles | |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
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Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | |
Contig N50 | |
Assembly Level | Complete Genome |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN02603041 |
NCBI Taxonomy ID | 96563 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Genome Browsers* | |
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Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. |
Feature | Count |
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gene | 4287 |
CDS | 4217 |
tRNA | 58 |
pseudo | 27 |
rRNA | 12 |
Localization | Count |
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Cytoplasmic | 1876 |
Cytoplasmic Membrane | 1028 |
Periplasmic | 112 |
Outer Membrane | 79 |
Extracellular | 26 |
Unknown | 973 |
Unknown (This protein may have multiple localization sites) | 123 |
Flagellar | 17 |
Fimbrial | 1 |
Name | Length | GC | |
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Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. | 4547930 bp | 63.9% |
Replicon details
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Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF | Orthologs |