| Strain Overview | |
|---|---|
| Organism Name | Pseudomonas aegrilactucae MAFF 301350 |
| Species | Pseudomonas aegrilactucae |
| Strain | MAFF 301350 |
| Description/Title | |
| Annotated Genes | 5084 |
| Partial Genes | 277 |
| Host Information |
|---|
| Geographic Location | |
|---|---|
| Location Name | Japan:Fukuoka |
| Sample Provider | |
|---|---|
| Name | Takashi Fujikawa |
| ftakashi@affrc.go.jp | |
| Institution | National Agriculture and Food Research Organization (NARO) |
| Date Collected | 1977 |
| Database | Scheme | Sequence Type | Alleles | |
|---|---|---|---|---|
| Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). | ||||
| Assembly | |
|---|---|
| Assembly DB |
RefSeq
|
| Assembly Accession | Assembly Status | latest |
| Scaffolds | 187 |
| Contigs | |
| Contig N50 | 69614 |
| Assembly Level | Contig |
| Percent GC |
| Cross-References | |
|---|---|
| NCBI BioSample Accession | SAMN19959866 |
| NCBI Taxonomy ID | 2854028 |
| NCBI Bioprojects |
| Related Data | |
|---|---|
| Additional Genome Project Info | |
| Sequencing Information | |
| Genome Assembly Information |
| Genomic | ORF DNA | Intergenic | Amino Acid |
| TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |