Pseudomonas aeruginosa UCBPP-PA14, PA14_12350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_12350
Name
Replicon chromosome
Genomic location 1063737 - 1065077 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_789138.1
GI 116052019
Entrez 4382010
INSDC ABJ13255.1
NCBI Locus Tag PA14_12350
UniParc UPI000013974E
UniProtKB Acc Q02SE8
UniProtKB ID MIAB_PSEAB
UniRef100 UniRef100_Q02SE8
UniRef50 UniRef50_A8AJE9
UniRef90 UniRef90_Q02SE8

Product

Feature Type CDS
Coding Frame 1
Product Name
(dimethylallyl)adenosine tRNA methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -9.09
Kyte-Doolittle Hydrophobicity Value -0.267
Molecular Weight (kDa) 50.0
Isoelectric Point (pI) 5.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001701 (487 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_12350

Human Homologs

Ensembl 110, assembly GRCh38.p14
CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
E-value: 3.1e-77
Percent Identity: 37.9
Ensembl 110, assembly GRCh38.p14
CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
E-value: 3.1e-77
Percent Identity: 37.9

References

No references are associated with this feature.