Pseudomonas aeruginosa UCBPP-PA14, PA14_13410 (prfC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_13410
Name
prfC
Replicon chromosome
Genomic location 1152100 - 1153683 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_789217.1
GI 116051940
Entrez 4381948
INSDC ABJ13176.1
NCBI Locus Tag PA14_13410
UniParc UPI0000133788
UniProtKB Acc Q02S69
UniProtKB ID RF3_PSEAB
UniRef100 UniRef100_B7VBK5
UniRef50 UniRef50_Q9KU64
UniRef90 UniRef90_A6V0K2

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide chain release factor 3
Synonyms
Evidence for Translation
Charge (pH 7) -12.84
Kyte-Doolittle Hydrophobicity Value -0.367
Molecular Weight (kDa) 59.9
Isoelectric Point (pI) 5.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001772 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_13410
Search term: prfC

Human Homologs

Ensembl 110, assembly GRCh38.p14
G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
E-value: 1.5e-46
Percent Identity: 29.1
Ensembl 110, assembly GRCh38.p14
G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
E-value: 1.5e-46
Percent Identity: 29.1

References

No references are associated with this feature.