Pseudomonas aeruginosa UCBPP-PA14, PA14_14460 (holC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_14460
Name
holC
Replicon chromosome
Genomic location 1234934 - 1235362 (- strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_789297.1
GI 116051860
Entrez 4381905
INSDC ABJ13096.1
NCBI Locus Tag PA14_14460
UniParc UPI00003961CF
UniProtKB Acc Q02RY9
UniProtKB ID Q02RY9_PSEAB
UniRef100 UniRef100_Q02RY9
UniRef50 UniRef50_O68823
UniRef90 UniRef90_O68823

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit chi
Synonyms
Evidence for Translation
Charge (pH 7) -2.11
Kyte-Doolittle Hydrophobicity Value -0.359
Molecular Weight (kDa) 16.1
Isoelectric Point (pI) 6.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 148 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001834 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_14460
Search term: holC

Human Homologs

References

No references are associated with this feature.