Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2975
|
Name |
rluC
Synonym: yceC |
Replicon | chromosome |
Genomic location | 3331348 - 3332304 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_251665.1 |
GI | 15598171 |
Affymetrix | PA2975_rluC_at |
DNASU | PaCD00007300 |
Entrez | 880474 |
GenBank | AAG06363.1 |
INSDC | AAG06363.1 |
NCBI Locus Tag | PA2975 |
protein_id(GenBank) | gb|AAG06363.1|AE004723_7|gnl|PseudoCAP|PA2975 |
TIGR | NTL03PA02975 |
UniParc | UPI00000C58AF |
UniProtKB Acc | Q9HZM9 |
UniProtKB ID | RLUC_PSEAE |
UniRef100 | UniRef100_Q9HZM9 |
UniRef50 | UniRef50_Q9HZM9 |
UniRef90 | UniRef90_Q9HZM9 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ribosomal large subunit pseudouridine synthase C
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 14.66 |
Kyte-Doolittle Hydrophobicity Value | -0.405 |
Molecular Weight (kDa) | 35.6 |
Isoelectric Point (pI) | 10.56 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 590 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002607 (533 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2975
Search term: rluC
Search term: ribosomal large subunit pseudouridine synthase C
|
Ensembl
110, assembly
GRCh38.p14
|
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value:
7.2e-20
Percent Identity:
28.6
|
The rluC gene of Escherichia coli codes for a pseudouridine synthase that is solely responsible for synthesis of pseudouridine at positions 955, 2504, and 2580 in 23 S ribosomal RNA.
Conrad J, Sun D, Englund N, Ofengand J
J Biol Chem 1998 Jul 17;273(29):18562-6
PubMed ID: 9660827
|