Pseudomonas aeruginosa PAO1, PA3517

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3517
Name
Replicon chromosome
Genomic location 3933317 - 3934750 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252207.1
GI 15598713
Affymetrix PA3517_at
Entrez 879063
GenBank AAG06905.1
INSDC AAG06905.1
NCBI Locus Tag PA3517
protein_id(GenBank) gb|AAG06905.1|AE004772_3|gnl|PseudoCAP|PA3517
TIGR NTL03PA03517
UniParc UPI00000C5A4D
UniProtKB Acc Q9HY92
UniProtKB ID Q9HY92_PSEAE
UniRef100 UniRef100_Q9HY92
UniRef50 UniRef50_Q9HY92
UniRef90 UniRef90_Q9HY92

Product

Feature Type CDS
Coding Frame 1
Product Name
probable lyase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -5.70
Kyte-Doolittle Hydrophobicity Value -0.157
Molecular Weight (kDa) 52.2
Isoelectric Point (pI) 6.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 642 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002146 (306 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3517
Search term: probable lyase

Human Homologs

References

Characterization of Bradyrhizobium japonicum pcaBDC genes involved in 4-hydroxybenzoate degradation.
Lorite MJ, Sanjuan J, Velasco L, Olivares J, Bedmar EJ
Biochim Biophys Acta 1998 May 11;1397(3):257-61
PubMed ID: 9582432