Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3822
|
Name |
Synonym: yajC |
Replicon | chromosome |
Genomic location | 4279007 - 4279345 (- strand) |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_252511.1 |
GI | 15599017 |
Affymetrix | PA3822_at |
DNASU | PaCD00007665 |
Entrez | 878280 |
GenBank | AAG07209.1 |
INSDC | AAG07209.1 |
NCBI Locus Tag | PA3822 |
protein_id(GenBank) | gb|AAG07209.1|AE004799_15|gnl|PseudoCAP|PA3822 |
TIGR | NTL03PA03822 |
UniParc | UPI00000C5B29 |
UniProtKB Acc | Q9HXI0 |
UniProtKB ID | Q9HXI0_PSEAE |
UniRef100 | UniRef100_W0YVN4 |
UniRef50 | UniRef50_Q4K6T0 |
UniRef90 | UniRef90_M4X3P6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
conserved hypothetical protein
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (11.86 kDa, PMID:21751344)
|
Charge (pH 7) | 2.22 |
Kyte-Doolittle Hydrophobicity Value | 0.388 |
Molecular Weight (kDa) | 11.9 |
Isoelectric Point (pI) | 9.61 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
YajC | YajC interacts with the AcrAB-TolC efflux pump in a way that in uncharacterized but is shown to grant increased fitness in the presence of linezolid, rifampicin, and vancomycin. [PMID:31871033] | ARO:3005040 | protein homolog model | Perfect | 217.2 | 100.0 | 3.2.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 453 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001844 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3822
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Genetic and molecular characterization of the Escherichia coli secD operon and its products.
Pogliano KJ, Beckwith J
J Bacteriol 1994 Feb;176(3):804-14
PubMed ID: 7507921
|
Distinct catalytic roles of the SecYE, SecG and SecDFyajC subunits of preprotein translocase holoenzyme.
Duong F, Wickner W
EMBO J 1997 May 15;16(10):2756-68
PubMed ID: 9184221
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|