Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3834
|
Name |
valS
|
Replicon | chromosome |
Genomic location | 4291356 - 4294208 (+ strand) |
RefSeq | NP_252523.1 |
GI | 15599029 |
Affymetrix | PA3834_valS_at |
Entrez | 879905 |
GenBank | AAG07221.1 |
INSDC | AAG07221.1 |
NCBI Locus Tag | PA3834 |
protein_id(GenBank) | gb|AAG07221.1|AE004800_10|gnl|PseudoCAP|PA3834 |
TIGR | NTL03PA03834 |
UniParc | UPI00000C5B31 |
UniProtKB Acc | Q9HXH0 |
UniProtKB ID | SYV_PSEAE |
UniRef100 | UniRef100_Q9HXH0 |
UniRef50 | UniRef50_Q9HXH0 |
UniRef90 | UniRef90_Q9HXH0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
valyl-tRNA synthetase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -24.53 |
Kyte-Doolittle Hydrophobicity Value | -0.378 |
Molecular Weight (kDa) | 107.7 |
Isoelectric Point (pI) | 5.23 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4XKZ | LIGASE | 01/12/15 | Crystal structure of the C-terminal anticodon loop binding domain of a valyl-tRNA synthetase from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.95 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 668 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001832 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3834
Search term: valS
Search term: valyl-tRNA synthetase
|
Ensembl
110, assembly
GRCh38.p14
|
valyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12651]
E-value:
1.3e-210
Percent Identity:
42.2
|
Ensembl
110, assembly
GRCh38.p14
|
valyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12651]
E-value:
1.3e-210
Percent Identity:
42.2
|
Ensembl
110, assembly
GRCh38.p14
|
valyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12651]
E-value:
1.3e-210
Percent Identity:
42.2
|
Ensembl
110, assembly
GRCh38.p14
|
valyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12651]
E-value:
1.3e-210
Percent Identity:
42.2
|
Ensembl
110, assembly
GRCh38.p14
|
valyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12651]
E-value:
1.3e-210
Percent Identity:
42.2
|
Ensembl
110, assembly
GRCh38.p14
|
valyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12651]
E-value:
1.3e-210
Percent Identity:
42.2
|
Valyl-tRNA synthetase gene of Escherichia coli K12. Primary structure and homology within a family of aminoacyl-TRNA synthetases.
Heck JD, Hatfield GW
J Biol Chem 1988 Jan 15;263(2):868-77
PubMed ID: 3275660
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|