Pseudomonas aeruginosa PAO1, PA3880

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA3880
Name
Replicon	chromosome
Genomic location	4347619 - 4348014 (+ strand)
Transposon Mutants	2 transposon mutants in PAO1

Cross-References

RefSeq	NP_252569.1
GI	15599075
Affymetrix	PA3880_at
DNASU	PaCD00007688
Entrez	878665
GenBank	AAG07267.1
INSDC	AAG07267.1
NCBI Locus Tag	PA3880
protein_id(GenBank)	gb|AAG07267.1|AE004805_5|gnl|PseudoCAP|PA3880
TIGR	NTL03PA03880
UniParc	UPI00000C5B55
UniProtKB Acc	Q9HXD2
UniProtKB ID	Q9HXD2_PSEAE
UniRef100	UniRef100_W0YXQ3
UniRef50	UniRef50_Q7WX83
UniRef90	UniRef90_A6V0M8

Product

Feature Type	CDS
Coding Frame	1
Product Name	conserved hypothetical protein Product Name Confidence: Class 4
Synonyms
Evidence for Translation	Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7)	0.71
Kyte-Doolittle Hydrophobicity Value	-0.119
Molecular Weight (kDa)	14.4
Isoelectric Point (pI)	7.31

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001791 (350 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA3880

Human Homologs

References