Pseudomonas aeruginosa PAO1, PA3979

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA3979
Name
Replicon	chromosome
Genomic location	4459418 - 4459750 (- strand)
Transposon Mutants in orthologs	2 transposon mutants in orthologs

Cross-References

RefSeq	NP_252668.1
GI	15599174
Affymetrix	PA3979_at
DNASU	PaCD00007738
Entrez	878902
GenBank	AAG07366.1
INSDC	AAG07366.1
NCBI Locus Tag	PA3979
protein_id(GenBank)	gb|AAG07366.1|AE004816_2|gnl|PseudoCAP|PA3979
TIGR	NTL03PA03979
UniParc	UPI00000C5BAD
UniProtKB Acc	Q9HX39
UniProtKB ID	Q9HX39_PSEAE
UniRef100	UniRef100_W0YUZ6
UniRef50	UniRef50_Q21FH5
UniRef90	UniRef90_W0YUZ6

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein Product Name Confidence: Class 4
Synonyms
Evidence for Translation	Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7)	-2.77
Kyte-Doolittle Hydrophobicity Value	-0.280
Molecular Weight (kDa)	12.6
Isoelectric Point (pI)	4.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 35 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001702 (501 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA3979

Human Homologs

References