Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4457
|
Name |
Synonym: yrbH Synonym: kdsD Synonym: kpsF |
Replicon | chromosome |
Genomic location | 4989305 - 4990285 (+ strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | BLAST: PA4457 vs NCBI, E = 3e-130 for arabinose 5-phosphate isomerase Pseudomonas fluorescens Pf-5. Modeling evidence, since necessary for KDO synthesis. |
RefSeq | NP_253147.1 |
GI | 15599653 |
Affymetrix | PA4457_at |
DNASU | PaCD00007933 |
Entrez | 881001 |
GenBank | AAG07845.1 |
INSDC | AAG07845.1 |
NCBI Locus Tag | PA4457 |
protein_id(GenBank) | gb|AAG07845.1|AE004860_1|gnl|PseudoCAP|PA4457 |
TIGR | NTL03PA04458 |
UniParc | UPI00000C5D1C |
UniProtKB Acc | Q9HVW0 |
UniProtKB ID | KDSD_PSEAE |
UniRef100 | UniRef100_Q9HVW0 |
UniRef50 | UniRef50_Q9HVW0 |
UniRef90 | UniRef90_Q9HVW0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
arabinose-5-phosphate isomerase KdsD
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -6.89 |
Kyte-Doolittle Hydrophobicity Value | 0.278 |
Molecular Weight (kDa) | 34.2 |
Isoelectric Point (pI) | 5.59 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 437 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004046 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4457
Search term: arabinose-5-phosphate isomerase KdsD
|
The complete genome sequence of Escherichia coli K-12.
Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y
Science 1997 Sep 5;277(5331):1453-62
PubMed ID: 9278503
|
Reduced polysialic acid capsule expression in Escherichia coli K1 mutants with chromosomal defects in kpsF.
Cieslewicz M, Vimr E
Mol Microbiol 1997 Oct;26(2):237-49
PubMed ID: 9383150
|
Biosynthesis pathway of ADP-L-glycero-beta-D-manno-heptose in Escherichia coli.
Kneidinger B, Marolda C, Graninger M, Zamyatina A, McArthur F, Kosma P, Valvano MA, Messner P
J Bacteriol 2002 Jan;184(2):363-9
PubMed ID: 11751812
|