Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4484
|
Name |
gatB
|
Replicon | chromosome |
Genomic location | 5015535 - 5016980 (+ strand) |
RefSeq | NP_253174.1 |
GI | 15599680 |
Affymetrix | PA4484_gatB_at |
Entrez | 881181 |
GenBank | AAG07872.1 |
INSDC | AAG07872.1 |
NCBI Locus Tag | PA4484 |
protein_id(GenBank) | gb|AAG07872.1|AE004862_6|gnl|PseudoCAP|PA4484 |
TIGR | NTL03PA04485 |
UniParc | UPI000012B15C |
UniProtKB Acc | Q9HVT7 |
UniProtKB ID | GATB_PSEAE |
UniRef100 | UniRef100_B7V024 |
UniRef50 | UniRef50_Q92QK5 |
UniRef90 | UniRef90_B7V024 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Glu-tRNA(Gln) amidotransferase subunit B
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -11.47 |
Kyte-Doolittle Hydrophobicity Value | -0.347 |
Molecular Weight (kDa) | 53.1 |
Isoelectric Point (pI) | 5.05 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4WJ3 | LIGASE/RNA | 09/29/14 | Crystal structure of the asparagine transamidosome from Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 3.705 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 567 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004073 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4484
Search term: gatB
Search term: Glu-tRNA(Gln) amidotransferase subunit B
|
Ensembl
110, assembly
GRCh38.p14
|
glutamyl-tRNA amidotransferase subunit B [Source:HGNC Symbol;Acc:HGNC:8849]
E-value:
3.2e-88
Percent Identity:
37.9
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|