Pseudomonas aeruginosa PAO1, PA5030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5030
Name
Synonym: ynfM
Replicon chromosome
Genomic location 5660357 - 5661673 (+ strand)
Transposon Mutants 5 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253717.1
GI 15600223
Affymetrix PA5030_at
Entrez 881212
GenBank AAG08415.1
INSDC AAG08415.1
NCBI Locus Tag PA5030
protein_id(GenBank) gb|AAG08415.1|AE004916_4|gnl|PseudoCAP|PA5030
TIGR NTL03PA05031
UniParc UPI00000C5ED5
UniProtKB Acc Q9HUD9
UniProtKB ID Q9HUD9_PSEAE
UniRef100 UniRef100_V6ANU7
UniRef50 UniRef50_P43531
UniRef90 UniRef90_V6ANU7

Product

Feature Type CDS
Coding Frame 1
Product Name
probable major facilitator superfamily (MFS) transporter
Product Name Confidence: Class 3
Synonyms probable MFS transporter
Evidence for Translation
Charge (pH 7) 8.60
Kyte-Doolittle Hydrophobicity Value 0.759
Molecular Weight (kDa) 46.7
Isoelectric Point (pI) 9.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 347 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004635 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5030

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295