Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5049
|
Name |
rpmE
|
Replicon | chromosome |
Genomic location | 5687105 - 5687320 (- strand) |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_253736.1 |
GI | 15600242 |
Affymetrix | PA5049_rpmE_at |
DNASU | PaCD00008171 |
Entrez | 881149 |
GenBank | AAG08434.1 |
INSDC | AAG08434.1 |
NCBI Locus Tag | PA5049 |
protein_id(GenBank) | gb|AAG08434.1|AE004918_4|gnl|PseudoCAP|PA5049 |
TIGR | NTL03PA05050 |
UniParc | UPI0000133F21 |
UniProtKB Acc | Q9HUD0 |
UniProtKB ID | RL31_PSEAE |
UniRef100 | UniRef100_B7V3E2 |
UniRef50 | UniRef50_Q7NX81 |
UniRef90 | UniRef90_A6VDH0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L31
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 4.55 |
Kyte-Doolittle Hydrophobicity Value | -0.331 |
Molecular Weight (kDa) | 7.9 |
Isoelectric Point (pI) | 8.77 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 564 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002073 (927 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5049
Search term: rpmE
Search term: 50S ribosomal protein L31
|
Primary structure of Escherichia coli ribosomal protein L31.
Brosius J
Biochemistry 1978 Feb 7;17(3):501-8
PubMed ID: 339950
|
Modification of Escherichia coli ribosomes with the fluorescent reagent N-[[(iodoacetyl)amino]ethyl]-5-naphthylamine-1-sulfonic acid. Identification of derivatized L31' and studies on its intraribosomal properties.
Hanas JS, Simpson MV
Biochemistry 1985 Dec 3;24(25):7303-9
PubMed ID: 3910100
|