Pseudomonas aeruginosa PAO1, PA0140 (ahpF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0140
Name
ahpF
Replicon chromosome
Genomic location 158907 - 160472 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_248830.1
GI 15595338
Affymetrix PA0140_ahpF_at
Entrez 879326
GenBank AAG03530.1
INSDC AAG03530.1
NCBI Locus Tag PA0140
protein_id(GenBank) gb|AAG03530.1|AE004452_2|gnl|PseudoCAP|PA0140
TIGR NTL03PA00141
UniParc UPI00000C4F5C
UniProtKB Acc Q9I6Z2
UniProtKB ID AHPF_PSEAE
UniRef100 UniRef100_Q9I6Z2
UniRef50 UniRef50_P35340
UniRef90 UniRef90_Q9I6Z2

Product

Feature Type CDS
Coding Frame 1
Product Name
alkyl hydroperoxide reductase subunit F
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -12.95
Kyte-Doolittle Hydrophobicity Value -0.002
Molecular Weight (kDa) 55.8
Isoelectric Point (pI) 5.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Cytoplasmic Class 2
Additional evidence for subcellular localization

AlphaFold Protein Structure Database

Available for P. aeruginosa PAO1.

View predicted 3D structure in AlphaFold DB

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 661 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000138 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0140
Search term: ahpF

Human Homologs

References

Isolation and analysis of the Xanthomonas alkyl hydroperoxide reductase gene and the peroxide sensor regulator genes ahpC and ahpF-oxyR-orfX.
Loprasert S, Atichartpongkun S, Whangsuk W, Mongkolsuk S
J. Bacteriol. 1997 Jun;179(12):3944-9
PubMed ID: 9190810