Pseudomonas aeruginosa PAO1, PA4342

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4342
Name
Replicon chromosome
Genomic location 4870428 - 4871912 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq NP_253032.1
GI 15599538
Affymetrix PA4342_at
Entrez 881456
GenBank AAG07730.1
INSDC AAG07730.1
NCBI Locus Tag PA4342
protein_id(GenBank) gb|AAG07730.1|AE004850_8|gnl|PseudoCAP|PA4342
TIGR NTL03PA04343
UniParc UPI00000C5CCD
UniProtKB Acc Q9HW59
UniProtKB ID Q9HW59_PSEAE
UniRef100 UniRef100_Q9HW59
UniRef50 UniRef50_C0ZU87
UniRef90 UniRef90_S0I3C0

Product

Feature Type CDS
Coding Frame 1
Product Name
probable amidase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -6.97
Kyte-Doolittle Hydrophobicity Value -0.150
Molecular Weight (kDa) 54.0
Isoelectric Point (pI) 5.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000201 (909 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4342
Search term: probable amidase

Human Homologs

Ensembl 110, assembly GRCh38.p14
glutaminyl-tRNA amidotransferase subunit QRSL1 [Source:HGNC Symbol;Acc:HGNC:21020]
E-value: 9.1e-30
Percent Identity: 34.7
Ensembl 110, assembly GRCh38.p14
glutaminyl-tRNA amidotransferase subunit QRSL1 [Source:HGNC Symbol;Acc:HGNC:21020]
E-value: 9.1e-30
Percent Identity: 34.7

References

No references are associated with this feature.