Pseudomonas aeruginosa PAO1, PA5440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5440
Name
Synonym: yegQ
Replicon chromosome
Genomic location 6123686 - 6125080 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_254127.1
GI 15600633
Affymetrix PA5440_at
Entrez 877846
GenBank AAG08825.1
INSDC AAG08825.1
NCBI Locus Tag PA5440
protein_id(GenBank) gb|AAG08825.1|AE004956_9|gnl|PseudoCAP|PA5440
TIGR NTL03PA05441
UniParc UPI00000C6009
UniProtKB Acc Q9HTC6
UniProtKB ID Q9HTC6_PSEAE
UniRef100 UniRef100_W0Z1W8
UniRef50 UniRef50_P76403
UniRef90 UniRef90_A6VEQ5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable peptidase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.17
Kyte-Doolittle Hydrophobicity Value -0.401
Molecular Weight (kDa) 51.8
Isoelectric Point (pI) 6.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 364 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004991 (519 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5440

Human Homologs

References

No references are associated with this feature.