Pseudomonas putida GB-1, PputGB1_0402

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0402
Name
Replicon chromosome
Genomic location 469513 - 470793 (+ strand)

Cross-References

RefSeq YP_001666649.1
GI 167031418
Entrez 5868140
INSDC ABY96313.1
NCBI Locus Tag PputGB1_0402
UniParc UPI0000F24774
UniProtKB Acc B0KJ63
UniProtKB ID B0KJ63_PSEPG
UniRef100 UniRef100_B0KJ63
UniRef50 UniRef50_R8AN22
UniRef90 UniRef90_R9V130

Product

Feature Type CDS
Coding Frame 1
Product Name
class III aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) 2.35
Kyte-Doolittle Hydrophobicity Value 0.012
Molecular Weight (kDa) 45096.2
Isoelectric Point (pI) 7.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000514 (456 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0402

Human Homologs

Ensembl 97, assembly GRCh38.p12
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 3.6e-47
Percent Identity: 35.4

References

No references are associated with this feature.