Pseudomonas syringae pv. syringae B728a, Psyr_1886

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_1886
Name
Replicon chromosome
Genomic location 2156083 - 2157570 (+ strand)

Cross-References

RefSeq YP_234970.1
GI 66045129
Entrez 3367395
NCBI Locus Tag Psyr_1886

Product

Feature Type CDS
Coding Frame 1
Product Name
hemolysin-type calcium-binding region
Synonyms
Evidence for Translation
Charge (pH 7) -45.66
Kyte-Doolittle Hydrophobicity Value -0.236
Molecular Weight (kDa) 52149.9
Isoelectric Point (pI) 4.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 82 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019217 (11 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1886

Human Homologs

References

No references are associated with this feature.