Pseudomonas syringae pv. syringae B728a, Psyr_1886
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest |
| Locus Tag |
Psyr_1886
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2156083 - 2157570 (+ strand) |
Cross-References
| RefSeq | YP_234970.1 |
| GI | 66045129 |
| Entrez | 3367395 |
| NCBI Locus Tag | Psyr_1886 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hemolysin-type calcium-binding region
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -45.66 |
| Kyte-Doolittle Hydrophobicity Value | -0.236 |
| Molecular Weight (kDa) | 52149.9 |
| Isoelectric Point (pI) | 4.06 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 82 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG019217 (9 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_1886
Search term: hemolysin-type calcium-binding region
|
Human Homologs
References
No references are associated with this feature.