Pseudomonas aeruginosa UCBPP-PA14, PA14_51470 (cupC1)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_51470
Name	cupC1
Replicon	chromosome
Genomic location	4576015 - 4576632 (- strand)
Transposon Mutants	1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	12 transposon mutants in orthologs

Cross-References

RefSeq	YP_792279.1
GI	116048920
Entrez	4380015
INSDC	ABJ10156.1
NCBI Locus Tag	PA14_51470
UniParc	UPI0000E44B75
UniProtKB Acc	Q02IF7
UniProtKB ID	Q02IF7_PSEAB
UniRef100	UniRef100_Q02IF7
UniRef50	UniRef50_Q9I4X7
UniRef90	UniRef90_Q9I4X7

Product

Feature Type	CDS
Coding Frame	1
Product Name	fimbrial subunit CupC1
Synonyms
Evidence for Translation
Charge (pH 7)	-3.83
Kyte-Doolittle Hydrophobicity Value	0.157
Molecular Weight (kDa)	20.2
Isoelectric Point (pI)	4.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Fimbrial Note: This is based on PSORTb V3.0 secondary localization prediction Class 3 20472543 Extracellular Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 26 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000955 (1577 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_51470 Search term: cupC1 Search term: fimbrial subunit CupC1

Human Homologs

References