Motif View

Internal ID 17655715
Source Database TransTermHP TERM 178
Feature Type terminator
Name
Rho-independent transcription terminator TERM 178
Sequence GCCCGGGGCGGGG
Look for more occurrences
Start 797851
End 797863
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGGCGGCAGGTGAA(5' tail) GCCCG(5' stem) GGG(loop) CGGGG(3' stem) TTTTTGTTGATTTCG(3' tail). Confidence: 91. overlap 797852

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685