Motif View

Internal ID 17655717
Source Database TransTermHP TERM 181
Feature Type terminator
Name
Rho-independent transcription terminator TERM 181
Sequence GCCCGCCTCGTGCGGGC
Look for more occurrences
Start 818769
End 818785
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCCGGAAAAAAAA(5' tail) GCCCGC(5' stem) ACGAG(loop) GCGGGC(3' stem) TGGAAAACGCCACAC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685