Motif View

Internal ID 17655719
Source Database TransTermHP TERM 184
Feature Type terminator
Name
Rho-independent transcription terminator TERM 184
Sequence TGGCCGGTGCACGTAGAGCGTGCTCCGGCCA
Look for more occurrences
Start 827322
End 827352
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTTTGAAAACGCAA(5' tail) TGGCCGGAGCACGC(5' stem) TCT(loop) ACGTGCACCGGCCA(3' stem) TGGGAATACTGGCGG(3' tail). Confidence: 93. overlap 827317

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685