Internal ID | 17655726 | Source Database | TransTermHP TERM 193 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 193
|
Sequence |
GACGGCCCGCCCCGCAAGGTGCGGGCCGTC Look for more occurrences |
Start | 856834 |
End | 856863 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas aeruginosa PAO1 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GCGCCCGCGCATGGA(5' tail) GACGGCCCGCCCC(5' stem) GCAA(loop) GGTGCGGGCCGTC(3' stem) GTTTTGTCCGGCGGC(3' tail). Confidence: 95. opp_overlap 856820 856819, overlap 856833 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|