Motif View

Internal ID 17655744
Source Database TransTermHP TERM 223
Feature Type terminator
Name
Rho-independent transcription terminator TERM 223
Sequence GCGCCAGCGGCTGGCGC
Look for more occurrences
Start 936389
End 936405
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGTCGTTTCCATG(5' tail) GCGCCAG(5' stem) CGG(loop) CTGGCGC(3' stem) TTTTCGTTCCGGTCC(3' tail). Confidence: 100. overlap 936361

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685