Motif View

Internal ID 17655745
Source Database TransTermHP TERM 224
Feature Type terminator
Name
Rho-independent transcription terminator TERM 224
Sequence GCGCCAGGCTGTCGCCTGGCGG
Look for more occurrences
Start 939824
End 939845
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCAACAGATGTGAG(5' tail) GCGCCAGGC(5' stem) TGTC(loop) GCCTGGCGG(3' stem) TTTTTCTCGTATATT(3' tail). Confidence: 100. overlap 939825

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685