Motif View

Internal ID 17655767
Source Database TransTermHP TERM 257
Feature Type terminator
Name
Rho-independent transcription terminator TERM 257
Sequence ATGCCGTGGCAGCCCGGCTGCCACGGTAA
Look for more occurrences
Start 1026240
End 1026268
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGTTAATGGGAAAA(5' tail) TTACCGTGGCAGC(5' stem) CGG(loop) GCTGCCACGGCAT(3' stem) CTGAATCAGCCGAAG(3' tail). Confidence: 100. overlap 1026243

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685