Motif View

Internal ID 17655778
Source Database TransTermHP TERM 275
Feature Type terminator
Name
Rho-independent transcription terminator TERM 275
Sequence GAAAAGCCCGCCCGACAAGGCGGGCTTTTC
Look for more occurrences
Start 1069487
End 1069516
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGACCGAGTCGATAT(5' tail) GAAAAGCCCGCC(5' stem) CGACAA(loop) GGCGGGCTTTTC(3' stem) TGTTTCCGCAGTCCG(3' tail). Confidence: 93. opp_overlap 1069492, overlap 1069492

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685