Motif View

Internal ID 17655826
Source Database TransTermHP TERM 362
Feature Type terminator
Name
Rho-independent transcription terminator TERM 362
Sequence GGCCTCCTGCGGGAGGCC
Look for more occurrences
Start 1571805
End 1571822
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCATTTCCCCTTTG(5' tail) GGCCTCC(5' stem) TGCG(loop) GGAGGCC(3' stem) TTTCTTTTTCCGGAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685